Cholinergic neurons, habenula


Likely locationHabenula
Developmental compartmentDiencephalon
Marker genes Gm5741 Gng8 Lrrc55
CommentsFurther split possible based on Acetylcholine, Th
Taxon Neurons
CNS neurons
Di- and mesencephalon neurons
Di- and mesencephalon excitatory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
26219.3 Gm5741 G protein subunit gamma 14
600.4 Gng8 guanine nucleotide binding protein (G protein), gamma 8
370.9 Lrrc55 Leucine-rich repeat-containing protein 55
369.3 Tac2 Tachykinin-3 Neurokinin-B
349.4 Nwd2 NACHT and WD repeat domain-containing protein 2

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.