Inhibitory neurons, hindbrain


Likely locationPons, interpeduncular and tegmental nuclei in rh1
Developmental compartmentRhombencephalon
Marker genes Chrna2 Nos1
Taxon Neurons
CNS neurons
Di- and mesencephalon neurons
Di- and mesencephalon inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
226.8 Chrna2 cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
149.2 Otp Homeobox protein orthopedia
118.9 Nos1 Nitric oxide synthase, brain
112.7 Sv2c synaptic vesicle glycoprotein 2c
102.8 Crisp1 Cysteine-rich secretory protein 1

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.