Inhibitory neurons, midbrain


RegionMidbrain dorsal
Likely locationSuperior colliculus superficial grey layer
Developmental compartmentMesencephalon
Marker genes Otx2 Gabrr2 Cdhr1
Taxon Neurons
CNS neurons
Di- and mesencephalon neurons
Di- and mesencephalon inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
502.0 Otx2 orthodenticle homeobox 2
498.3 Cdhr1 Cadherin-related family member 1
434.6 Gabrr2 Gamma-aminobutyric acid receptor subunit rho-2
359.0 Sox14 Transcription factor SOX-14
220.7 Chrnb3 cholinergic receptor, nicotinic, beta polypeptide 3

Heatmap and tSNE plot

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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.