Inhibitory neurons, midbrain


RegionMidbrain dorsal
Likely locationSuperior colliculus
Developmental compartmentMesencephalon
Marker genes Pax7 Tfap2b Cdhr1 Rnf152 Zfhx4
Taxon Neurons
CNS neurons
Di- and mesencephalon neurons
Di- and mesencephalon inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
452.0 Pax7 Paired box protein Pax-7
315.1 Tfap2b transcription factor AP-2 beta
138.1 Pla2g5 phospholipase A2, group V
127.7 Cdhr1 Cadherin-related family member 1
91.5 Sox14 Transcription factor SOX-14

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.