D1 medium spiny neurons, striatum

Properties

Index27
SymbolMSN1
Cells869
RegionStriatum dorsal
Likely locationStriatum dorsal
Developmental compartmentTelencephalon
NeurotransmittersGABA
Marker genes Drd1 Ido1 Ppp1r1b
Comments
Taxon Neurons
CNS neurons
Telencephalon projecting neurons
Telencephalon projecting inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
449.0 Drd1 D(1A) dopamine receptor
281.4 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B
256.2 Rgs9 Regulator of G-protein signaling 9
237.2 Ido1 Indoleamine 2,3-dioxygenase 1
234.3 Mhrt myosin heavy chain associated RNA transcript

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.