D2 medium spiny neurons, striatum

Properties

Index28
SymbolMSN2
Cells1094
RegionStriatum dorsal
Likely locationStriatum dorsal
Developmental compartmentTelencephalon
NeurotransmittersGABA
Marker genes Adora2a Ido1
Comments
Taxon Neurons
CNS neurons
Telencephalon projecting neurons
Telencephalon projecting inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
753.3 Adora2a adenosine A2a receptor
506.5 Penk Proenkephalin-A Synenkephalin Met-enkephalin PENK(114-133) PENK(143-184) Met-enkephalin-Arg-Ser-Leu Leu-enkephalin PENK(238-259) Met-enkephalin-Arg-Phe
332.3 Gpr88 Probable G-protein coupled receptor 88
249.6 Rgs9 Regulator of G-protein signaling 9
227.6 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
Preview not available. Click for full-size image.

Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.