D2 medium spiny neurons, striatum

Properties

Index29
SymbolMSN3
Cells1247
RegionStriatum ventral
Likely locationStriatum ventral
Developmental compartmentTelencephalon
NeurotransmittersGABA
Marker genes Adora2a Gpr83 Penk
Comments
Taxon Neurons
CNS neurons
Telencephalon projecting neurons
Telencephalon projecting inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
336.0 Adora2a adenosine A2a receptor
224.6 Penk Proenkephalin-A Synenkephalin Met-enkephalin PENK(114-133) PENK(143-184) Met-enkephalin-Arg-Ser-Leu Leu-enkephalin PENK(238-259) Met-enkephalin-Arg-Phe
126.9 Gpr88 Probable G-protein coupled receptor 88
107.0 Mhrt myosin heavy chain associated RNA transcript
91.2 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.