Excitatory neurons, cerebral cortex


Likely locationCortical pyramidal layer 5
Developmental compartmentTelencephalon
Marker genes Hs3st2 Vipr1 Pde1a
CommentsRemaining heterogeneity for VGLUT2, Nitric oxide
Taxon Neurons
CNS neurons
Telencephalon projecting neurons
Telencephalon projecting excitatory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
190.8 Hs3st2 Heparan sulfate glucosamine 3-O-sulfotransferase 2
156.8 Scube1 signal peptide, CUB domain, EGF-like 1
140.7 Myl4 Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA.
137.8 Dkkl1 Dickkopf-like protein 1
112.3 Pde1a phosphodiesterase 1A, calmodulin-dependent

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.