Inhibitory neurons, pallidum


Likely locationMedial septal nucleus and Magnocellular nucleus
Developmental compartmentTelencephalon
Marker genes Lhx8 Gbx1 Elfn1
Taxon Neurons
CNS neurons
Di- and mesencephalon neurons
Di- and mesencephalon inhibitory neurons

Enriched genes

Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.

Score Gene Description
322.6 Lhx8 LIM/homeobox protein Lhx8
228.4 Lhx6 Mus musculus LIM homeobox protein 6 (Lhx6), transcript variant 5, mRNA.
146.1 Gbx1 Homeobox protein GBX-1
63.4 Elfn1 Protein ELFN1
59.6 Cacna2d2 Voltage-dependent calcium channel subunit alpha-2/delta-2 Voltage-dependent calcium channel subunit alpha-2-2 Voltage-dependent calcium channel subunit delta-2

Heatmap and tSNE plot

Click for heatmap in loom viewer tSNE in loom viewer
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Spatial distribution

Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.