1500009C09Rik

Mus musculus RIKEN cDNA 1500009C09 gene (1500009C09Rik), transcript variant 2, long non-coding RNA.

Properties

Gene1500009C09Rik
EntrezID 76505
RefSeqIDs NR_037697
GeneCardID
Allen Brain
UniProtIDs with links

Clusters expressing 1500009C09Rik

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.7512 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.6554 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
1.4672 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
0.8364 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.7596 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.513 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
1.0393 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.9703 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.8961 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
0.9039 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.5602 11 TEGLU6 Excitatory neurons, cerebral cortex Telencephalon
0.8976 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.9143 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
1.3095 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
1.2459 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.9194 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.7513 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.7215 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.8764 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.8434 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
1.2692 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.9127 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.5812 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
1.3533 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.5636 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
0.4201 26 DGGRC2 Granule neurons, dentate gyrus Telencephalon
0.5984 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
0.4771 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.4964 29 MSN3 D2 medium spiny neurons, striatum Telencephalon
0.5499 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
0.4113 31 MSN5 Patch D1/D2 neurons, striatum Telencephalon
0.3295 32 MSN6 Matrix D1 neurons, striatum Telencephalon
0.6131 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
0.3478 40 OBINH2 Inner horizontal cell, olfactory bulb Telencephalon
0.5148 45 OBDOP1 Dopaminergic periglomerular interneuron, olfactory bulb Telencephalon
0.9821 46 OBINH5 External plexiform layer interneuron, olfactory bulb Telencephalon
1.1622 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
1.2515 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
1.3511 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
1.4808 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
1.1865 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
1.0104 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.8665 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.6698 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.5829 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
1.1942 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
1.4417 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
1.6643 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
1.0679 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
1.1446 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
1.2045 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.5953 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.6125 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.6667 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
1.1765 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.8 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
1.281 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
1.0263 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
1.6923 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
1.3889 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.95 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.4783 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.6154 73 HYPEP7 Pmch neurons, hypothalamus Diencephalon
1.5313 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
1.0851 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
1.3968 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
1.6857 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
2.0275 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
1.1609 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
2.3125 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
1.5417 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.5793 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.6931 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
1.4211 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.75 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.8355 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.6335 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
0.7209 89 HYPEP2 Peptidergic neurons, hypothalamus Diencephalon
0.9524 90 MEINH14 Inhibitory neurons, midbrain Mesencephalon
0.6667 91 DEINH6 Peptidergic neurons, hypothalamus Diencephalon
0.35 92 DEINH8 Inhibitory neurons, hypothalamus Diencephalon
0.6532 94 HYPEP5 Vasopressin-producing cells, hypothalamus Diencephalon
1.3776 95 HYPEP4 Oxytocin-producing cells, hypothalamus Diencephalon
1.6 96 HYPEP8 Peptidergic neurons, hypothalamus Diencephalon
0.7 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.9692 98 SCINH10 Inhibitory neurons, spinal cord Spinal cord
0.7857 99 SCINH9 Inhibitory neurons, spinal cord Spinal cord
0.5057 100 SCINH8 Inhibitory neurons, spinal cord Spinal cord
0.4648 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.6207 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
1.7273 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
0.7297 104 SCINH4 Inhibitory neurons, spinal cord Spinal cord
1.0606 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.7755 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
1.2564 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
1.2115 108 SCGLU1 Excitatory neurons, spinal cord Spinal cord
0.8421 109 SCGLU2 Excitatory neurons, spinal cord Spinal cord
1.0645 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.8333 111 SCGLU4 Excitatory neurons, spinal cord Spinal cord
0.7817 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.4071 113 SCGLU6 Excitatory neurons, spinal cord Spinal cord
1.0667 115 SCGLU8 Excitatory neurons, spinal cord Spinal cord
1.1364 116 SCGLU9 Excitatory neurons, spinal cord Spinal cord
0.7941 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.6125 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.729 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
0.915 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.9435 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.9124 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
1.0798 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
1.2281 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.558 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.6492 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.8313 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.8854 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
1.1245 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.9194 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
1.8811 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
1.0463 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.8015 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.8454 135 DECHO2 Cholinergic neurons, habenula Diencephalon
1.7692 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
1.466 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
1.4942 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.9632 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
1.2871 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.8163 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
1.1584 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
1.5126 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
1.3375 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
1.3442 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
1.9362 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
1.0 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
1.1543 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
1.0659 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
1.3313 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
1.4577 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
1.1827 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
1.3906 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
1.0857 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.3944 155 MEINH8 Inhibitory neurons, midbrain Mesencephalon
0.5733 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
1.5806 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
1.4545 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
1.0 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
2.0455 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
2.4286 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
2.3077 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
2.1706 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
1.88 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
3.0909 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
1.299 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
1.44 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
1.2727 170 HBINH8 Inhibitory neurons, hindbrain Rhombencephalon
1.6111 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
0.4419 173 MEINH1 Inhibitory neurons, midbrain Mesencephalon
0.5015 174 CBINH1 Molecular layer interneurons, cerebellum Rhombencephalon
1.3929 175 CBPC Purkinje cells Rhombencephalon
1.1282 179 SEPNBL Neuroblasts, septum Telencephalon
2.9568 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.8356 181 OBNBL2 Neuroblasts, olfactory bulb Telencephalon
0.8969 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.7101 190 ENT9 Cholinergic enteric neurons Neural crest
1.0515 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
2.1774 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
1.2738 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
1.2667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.9238 227 EPEN Ependymal cells CNS
0.3547 229 RGDG Dentate gyrus radial glia-like cells Telencephalon
0.5476 230 RGSZ Subventricular zone radial glia-like cells Telencephalon
0.8278 231 ACTE1 Telencephalon astrocytes, fibrous Telencephalon
0.3884 232 ACTE2 Telencephalon astrocytes, protoplasmic Telencephalon
0.5487 233 ACOB Olfactory astrocytes Telencephalon
0.507 235 ACNT2 Non-telencephalon astrocytes, fibrous Diencephalon,Mesencephalon,Rhombencephalon,Spinal cord
0.6039 236 ACMB Dorsal midbrain Myoc-expressing astrocyte-like Mesencephalon
0.3305 239 OPC Oligodendrocytes precursor cells CNS

1500009C09Rik is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6