2900055J20Rik

Mus musculus RIKEN cDNA 2900055J20 gene (2900055J20Rik), long non-coding RNA.

Properties

Gene2900055J20Rik
EntrezID 73001
RefSeqIDs NR_045177
GeneCardID
Allen Brain
UniProtIDs with links Q9D6G3

Clusters expressing 2900055J20Rik

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.6152 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
1.2182 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
2.2001 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
4.4767 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
1.6028 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
1.2475 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
3.338 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
4.7417 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
1.6856 11 TEGLU6 Excitatory neurons, cerebral cortex Telencephalon
2.3622 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.8 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
1.1746 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
2.2131 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
2.6097 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
1.3181 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
1.2584 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
1.7213 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
1.0577 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.619 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
1.6146 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
1.2314 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.941 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
1.1022 26 DGGRC2 Granule neurons, dentate gyrus Telencephalon
1.4568 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
1.2532 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
1.2205 29 MSN3 D2 medium spiny neurons, striatum Telencephalon
1.3782 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
1.0161 31 MSN5 Patch D1/D2 neurons, striatum Telencephalon
0.8343 32 MSN6 Matrix D1 neurons, striatum Telencephalon
2.0383 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
1.3054 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.5795 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
1.0788 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.3377 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
2.3898 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
3.8363 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
2.7536 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
1.8993 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
1.9877 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
2.9357 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
1.2531 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
1.7659 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
4.1121 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
1.4093 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3786 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3509 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
0.7941 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.7655 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.4552 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.4063 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.4035 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.3539 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.3521 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.4368 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
0.4444 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.7794 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.3875 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.3839 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.562 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
0.4085 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
0.6654 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
1.2681 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
1.1016 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.8189 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.6611 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
1.5341 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
2.4615 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.9964 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.7794 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.9055 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.6265 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.3252 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.495 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.7347 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.5152 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.4025 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.4468 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
0.5072 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
0.321 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.3101 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
0.6714 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.8873 155 MEINH8 Inhibitory neurons, midbrain Mesencephalon
0.4 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
0.6129 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
0.4153 187 ENT6 Cholinergic enteric neurons Neural crest
0.4677 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.4988 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.5934 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
0.7391 195 SYNOR5 Noradrenergic erector muscle neurons Neural crest
0.8 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.4667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
1.25 198 PSPEP8 Peptidergic (TrpM8), DRG Neural crest
0.4063 199 PSPEP7 Peptidergic (TrpM8), DRG Neural crest
1.2593 200 PSPEP6 Peptidergic (TrpM8), DRG Neural crest
0.9333 201 PSPEP5 Peptidergic (PEP1.2), DRG Neural crest
0.8235 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
1.188 203 PSPEP4 Peptidergic (PEP1.1), DRG Neural crest
1.2174 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.6026 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
0.4839 206 PSNF3 Neurofilament (NF2/3), DRG Neural crest
1.0355 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
1.1944 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
1.4 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
1.1333 212 PSNP4 Non-peptidergic (NP2.1), DRG Neural crest
1.6364 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
1.9773 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest

2900055J20Rik is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6