Abat

Mus musculus 4-aminobutyrate aminotransferase (Abat)

Properties

GeneAbat
EntrezID 268860
RefSeqIDs NM_172961 NM_001170978
GeneCardID
Allen Brain 92603
UniProtIDs with links P61922-2 P61922 Q3TUE8

Clusters expressing Abat

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.3582 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.6095 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
0.5669 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.4 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
0.4918 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.4904 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.7304 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.2996 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.9333 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
0.691 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.7899 29 MSN3 D2 medium spiny neurons, striatum Telencephalon
0.8946 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
0.5806 31 MSN5 Patch D1/D2 neurons, striatum Telencephalon
0.2914 32 MSN6 Matrix D1 neurons, striatum Telencephalon
0.3383 40 OBINH2 Inner horizontal cell, olfactory bulb Telencephalon
0.3173 43 OBNBL4 Inhibitory neurons, olfactory bulb Telencephalon
0.3812 44 OBNBL5 Inhibitory neurons, olfactory bulb Telencephalon
1.434 45 OBDOP Dopaminergic periglomerular interneuron, olfactory bulb Telencephalon
0.6429 46 OBINH6 External plexiform layer interneuron, olfactory bulb Telencephalon
1.9263 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
2.2216 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
1.9956 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
2.3729 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
1.4375 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.961 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
1.2174 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.6286 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.6327 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
3.3525 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
3.7362 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
7.6536 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
3.1111 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
3.0826 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
6.3833 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.8574 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.4432 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.9649 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
0.6618 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.469 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
4.3306 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
6.4912 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
2.6923 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
2.2778 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
1.625 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.5217 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
1.5385 73 HYPEP7 Pmch neurons, hypothalamus Diencephalon
2.0625 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
1.3191 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
1.4286 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
6.019 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
5.4495 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
4.2989 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
4.0469 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
2.0972 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.7379 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.7842 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
1.1053 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
1.0292 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
1.0658 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.6963 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
0.5116 89 HYPEP2 Peptidergic neurons, hypothalamus Diencephalon
1.0 91 DEINH6 Peptidergic neurons, hypothalamus Diencephalon
0.4667 92 DEINH8 Inhibitory neurons, hypothalamus Diencephalon
0.5202 94 HYPEP5 Vasopressin-producing cells, hypothalamus Diencephalon
0.5714 95 HYPEP4 Oxytocin-producing cells, hypothalamus Diencephalon
0.66 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.6615 98 SCINH10 Inhibitory neurons, spinal cord Spinal cord
0.338 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.4483 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
2.7955 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
0.6757 104 SCINH4 Inhibitory neurons, spinal cord Spinal cord
0.9242 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
1.1939 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
1.6154 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.8462 108 SCGLU1 Excitatory neurons, spinal cord Spinal cord
0.4135 109 SCGLU2 Excitatory neurons, spinal cord Spinal cord
0.5161 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.3667 111 SCGLU4 Excitatory neurons, spinal cord Spinal cord
0.3667 114 SCGLU7 Excitatory neurons, spinal cord Spinal cord
0.8824 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.725 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.6636 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
1.46 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.6964 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.7737 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
1.2559 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
1.7148 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.587 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.3738 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.4362 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.4964 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.5141 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.6774 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
1.2448 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.5338 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.625 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.343 135 DECHO2 Cholinergic neurons, habenula Diencephalon
0.8846 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
1.2202 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
1.2296 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
1.1905 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
1.198 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
1.0612 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.6535 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
0.9432 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.845 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
1.2727 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
1.4255 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
1.1884 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
1.7716 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
2.1434 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
2.8 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
2.5249 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
2.5944 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
3.1736 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
1.4143 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.5915 155 MEINH8 Inhibitory neurons, midbrain Mesencephalon
0.7692 156 HBINH1 Inhibitory neurons, hindbrain Rhombencephalon
0.685 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
1.2 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
3.1129 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
3.8182 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
2.0 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
3.5909 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
5.1429 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
0.9692 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.5516 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.7673 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
2.1818 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
1.2784 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
1.6 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
3.2727 170 HBINH8 Inhibitory neurons, hindbrain Rhombencephalon
4.3889 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
1.9412 172 CBINH2 Granular layer interneurons, cerebellum Rhombencephalon
0.8837 173 MEINH1 Inhibitory neurons, midbrain Mesencephalon
0.6662 174 CBINH1 Molecular layer interneurons, cerebellum Rhombencephalon
0.7949 179 SEPNBL Neuroblasts, septum Telencephalon
0.44 181 OBNBL2 Neuroblasts, olfactory bulb Telencephalon
0.9626 183 ENT2 Nitrergic enteric neurons Neural crest
0.4065 184 ENT3 Nitrergic enteric neurons Neural crest
0.661 187 ENT6 Cholinergic enteric neurons Neural crest
0.7097 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
1.1856 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
1.0412 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
1.1452 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
1.7531 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
1.5 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
0.6957 195 SYNOR5 Noradrenergic erector muscle neurons Neural crest
1.04 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.6667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.5 201 PSPEP5 Peptidergic (PEP1.2), DRG Neural crest
0.6275 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.5652 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.9556 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.4318 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
0.7197 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.4321 215 COP1 Committed oligodendrocytes cells (COP) CNS
0.5512 216 COP2 Committed oligodendrocytes cells (COP), pons/medulla specific CNS
0.7459 217 NFOL2 Newly formed oligodendrocytes (NFOL), pons/medulla specific CNS
0.6253 218 NFOL1 Newly formed oligodendrocytes (NFOL) CNS
0.3097 219 MFOL2 Myelin forming oligodendrocytes (MFOL) CNS
0.9279 224 CHOR Chorid plexus epithelial cells CNS
0.9703 227 EPEN Ependymal cells CNS
0.6762 231 ACTE1 Telencephalon astrocytes, fibrous Telencephalon
0.2716 232 ACTE2 Telencephalon astrocytes, protoplasmic Telencephalon
0.5181 233 ACOB Olfactory astrocytes Telencephalon
0.2983 234 ACNT1 Non-telencephalon astrocytes, protoplasmic Diencephalon,Mesencephalon,Rhombencephalon,Spinal cord
1.1854 235 ACNT2 Non-telencephalon astrocytes, fibrous Diencephalon,Mesencephalon,Rhombencephalon,Spinal cord
0.6551 236 ACMB Dorsal midbrain Myoc-expressing astrocyte-like Mesencephalon
0.3884 241 SATG2 Satellite glia Neural crest

Abat is a marker of the following clusters

Expression Index Symbol Description Region

ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH6 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBINH5 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6