Abcf1

Mus musculus ATP-binding cassette, sub-family F (GCN20), member 1 (Abcf1)

Properties

GeneAbcf1
EntrezID 224742
RefSeqIDs NM_013854
GeneCardID
Allen Brain
UniProtIDs with links Q6P542

Clusters expressing Abcf1

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.3361 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
0.4088 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
0.4182 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.4331 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.329 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
0.5958 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.3564 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.3676 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
0.4612 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.4016 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.6571 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
0.4683 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
0.2951 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.5591 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.4222 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.4079 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.4382 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.2923 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
0.4423 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.4669 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.3422 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.5207 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.3072 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
0.319 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.354 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
0.4311 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.3126 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.4004 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.4452 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.2935 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.3261 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.5036 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.5337 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
0.5214 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.4321 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
0.463 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.4985 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.5289 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.5702 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.5962 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
0.6944 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.5652 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.7692 73 HYPEP7 Pmch neurons, hypothalamus Diencephalon
0.5143 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
0.6239 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.5287 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
0.8438 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
0.375 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.3655 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.4545 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
0.3367 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.3932 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.36 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.3992 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.2787 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.3414 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.4677 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
0.4895 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.5962 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.6824 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.821 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.4016 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.5347 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.2816 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.5532 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
0.4259 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.3527 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
0.5583 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.4165 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.3622 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.4392 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.4839 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
0.5455 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
0.8636 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
1.4154 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
0.6865 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.7345 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
1.7273 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
0.4227 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.3957 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.7143 182 ENT1 Nitrergic enteric neurons Neural crest
0.5047 183 ENT2 Nitrergic enteric neurons Neural crest
0.3806 184 ENT3 Nitrergic enteric neurons Neural crest
0.3355 185 ENT4 Cholinergic enteric neurons Neural crest
0.3359 186 ENT5 Cholinergic enteric neurons Neural crest
0.4661 187 ENT6 Cholinergic enteric neurons Neural crest
0.5806 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
0.732 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.7041 190 ENT9 Cholinergic enteric neurons Neural crest
0.7113 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
0.7258 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.7042 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.533 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
0.76 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.9333 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.4286 198 PSPEP8 Peptidergic (TrpM8), DRG Neural crest
0.4333 201 PSPEP5 Peptidergic (PEP1.2), DRG Neural crest
0.5098 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.3932 203 PSPEP4 Peptidergic (PEP1.1), DRG Neural crest
0.4348 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.5 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
0.6129 206 PSNF3 Neurofilament (NF2/3), DRG Neural crest
0.7368 207 PSNF2 Neurofilament (NF4/5), DRG Neural crest
0.578 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.6389 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
0.7444 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.6889 212 PSNP4 Non-peptidergic (NP2.1), DRG Neural crest
0.5909 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
0.8485 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.2723 218 NFOL1 Newly formed oligodendrocytes (NFOL) CNS
0.2741 219 MFOL2 Myelin forming oligodendrocytes (MFOL) CNS
0.2406 222 MOL2 Mature oligodendrocytes, hindbrain CNS
0.3851 223 MOL3 Mature oligodendrocytes, spinal cord enriched (high Klk6) CNS
0.2804 227 EPEN Ependymal cells CNS
0.2905 241 SATG2 Satellite glia Neural crest
0.4 242 SATG1 Satellite glia, proliferating Neural crest
0.4172 243 ENTG1 Enteric glia, proliferating Neural crest
0.3796 251 ABC Vascular leptomeningeal cells Neural crest
0.3122 257 PER1 Pericytes Mesoderm
0.4611 258 PER2 Pericytes, possibly mixed with VENC Mesoderm
0.2663 259 VECC Vascular endothelial cells, capillary Mesoderm

Abcf1 is a marker of the following clusters

Expression Index Symbol Description Region

ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH6 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBINH5 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6