Col25a1

Mus musculus collagen, type XXV, alpha 1 (Col25a1)

Properties

GeneCol25a1
EntrezID 77018
RefSeqIDs NM_001244952 NM_029838 NM_198711
GeneCardID
Allen Brain
UniProtIDs with links Q99MQ5 E9Q5L6 B2RQR7

Clusters expressing Col25a1

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.6727 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.3472 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
0.4446 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.2747 26 DGGRC2 Granule neurons, dentate gyrus Telencephalon
0.4538 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
2.2571 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
1.8292 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.6835 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
3.2515 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
6.1571 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
2.1173 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
2.5972 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
5.7076 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.8889 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
2.3143 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
2.0367 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.5743 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.3167 92 DEINH8 Inhibitory neurons, hypothalamus Diencephalon
1.5524 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
2.8327 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
1.5735 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.4058 135 DECHO2 Cholinergic neurons, habenula Diencephalon
2.0 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.6181 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.6109 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.8203 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
3.0 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
1.0177 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
1.8 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.7597 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
1.1495 183 ENT2 Nitrergic enteric neurons Neural crest
0.5196 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
1.1387 251 ABC Vascular leptomeningeal cells Neural crest

Col25a1 is a marker of the following clusters

Expression Index Symbol Description Region
2.8327 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
1.5735 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
3.0 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon

ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH6 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBINH5 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6