Cnr1

Mus musculus cannabinoid receptor 1 (brain) (Cnr1)

Properties

GeneCnr1
EntrezID 12801
RefSeqIDs NM_007726
GeneCardID
Allen Brain 12584
UniProtIDs with links P47746

Clusters expressing Cnr1

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.7091 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.6489 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
1.0115 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.292 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
1.0394 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.7143 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
0.5902 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.5536 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
1.9178 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
1.4494 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
1.191 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
3.4423 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.9443 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.5199 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.8719 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
1.6283 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
1.1079 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.479 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.7111 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.5009 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
1.8125 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.387 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.427 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.8354 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
3.7938 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
3.9784 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
22.3681 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
57.1179 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
13.1543 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
17.4596 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
52.9379 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
6.1039 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
2.461 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
2.386 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
3.2059 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
2.5931 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
1.6612 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
5.6316 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
2.5139 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
1.275 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
1.0435 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.7083 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.5614 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.3734 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.4293 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
1.4286 90 MEINH14 Inhibitory neurons, midbrain Mesencephalon
0.5192 108 SCGLU1 Excitatory neurons, spinal cord Spinal cord
0.3871 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.9159 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
2.2 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.8363 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.6996 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.7609 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.4131 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.4516 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
1.0 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.7885 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.5274 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.449 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.3889 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.469 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
1.025 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.7007 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.8885 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
1.5 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.5433 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
1.32 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
4.6818 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
0.4385 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.2063 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.5964 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
8.8235 172 CBINH2 Granular layer interneurons, cerebellum Rhombencephalon
1.1163 173 MEINH1 Inhibitory neurons, midbrain Mesencephalon
1.3353 174 CBINH1 Molecular layer interneurons, cerebellum Rhombencephalon
0.4785 178 CBNBL1 Neuroblasts, cerebellum Rhombencephalon
1.2143 182 ENT1 Nitrergic enteric neurons Neural crest
1.8224 183 ENT2 Nitrergic enteric neurons Neural crest
2.2194 184 ENT3 Nitrergic enteric neurons Neural crest
0.6258 185 ENT4 Cholinergic enteric neurons Neural crest
0.8224 186 ENT5 Cholinergic enteric neurons Neural crest
1.9322 187 ENT6 Cholinergic enteric neurons Neural crest
2.5484 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
4.0103 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
17.7219 190 ENT9 Cholinergic enteric neurons Neural crest
0.4639 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
0.8133 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.4667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.4 201 PSPEP5 Peptidergic (PEP1.2), DRG Neural crest
0.7353 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest

Cnr1 is a marker of the following clusters

Expression Index Symbol Description Region
22.3681 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6