Cpsf6

Mus musculus cleavage and polyadenylation specific factor 6 (Cpsf6)

Properties

GeneCpsf6
EntrezID 432508
RefSeqIDs NM_001013391 NM_001310609
GeneCardID
Allen Brain 129101
UniProtIDs with links Q6NVF9 H3BKW0 H3BJ30

Clusters expressing Cpsf6

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.3723 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
0.4 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.3204 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.3057 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
0.3868 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.3812 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.2862 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
0.3138 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.622 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.5079 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
0.6393 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.5054 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.3992 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.4201 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.4944 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.5192 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.3705 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.2754 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.4421 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.3368 36 SZNBL Neuronal intermidate progenitor cells Telencephalon
0.3713 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.3016 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.3173 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.3602 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.4317 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.4663 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
0.5429 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.4758 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.3471 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.693 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.8654 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
1.1806 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.675 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.5217 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.4375 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
0.3404 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
0.3016 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
0.3905 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
0.8807 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.4138 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
0.7813 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
1.0278 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.4694 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.4673 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
0.77 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.2887 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.365 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.2852 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.3246 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.3333 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.4476 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
1.0769 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.5076 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.4903 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.4079 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.4286 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.3106 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.2752 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
0.7521 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.3796 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.3684 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.375 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.4615 156 HBINH1 Inhibitory neurons, hindbrain Rhombencephalon
0.4094 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
0.5333 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
0.9516 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
1.3636 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
0.7 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
1.0455 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
1.1429 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
1.2077 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.0198 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.9818 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
2.4545 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
0.6186 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.64 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
0.9091 170 HBINH8 Inhibitory neurons, hindbrain Rhombencephalon
0.3957 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.7143 182 ENT1 Nitrergic enteric neurons Neural crest
0.9533 183 ENT2 Nitrergic enteric neurons Neural crest
0.5742 184 ENT3 Nitrergic enteric neurons Neural crest
0.5871 185 ENT4 Cholinergic enteric neurons Neural crest
0.5483 186 ENT5 Cholinergic enteric neurons Neural crest
0.7797 187 ENT6 Cholinergic enteric neurons Neural crest
0.9032 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
0.8041 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.8343 190 ENT9 Cholinergic enteric neurons Neural crest
0.4132 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.4 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.4 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.4118 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.3077 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
0.3688 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.3333 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
0.3148 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.3864 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.3858 216 COP2 Committed oligodendrocytes cells (COP), pons/medulla specific CNS
0.3757 217 NFOL2 Newly formed oligodendrocytes (NFOL), pons/medulla specific CNS
0.2831 220 MFOL1 Myelin forming oligodendrocytes (MFOL) CNS
0.3341 224 CHOR Chorid plexus epithelial cells CNS
0.5767 243 ENTG1 Enteric glia, proliferating Neural crest
0.2642 249 ENTG7 Enteric glia Neural crest

Cpsf6 is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6