Sox11

Mus musculus SRY (sex determining region Y)-box 11 (Sox11)

Properties

GeneSox11
EntrezID 20666
RefSeqIDs NM_009234
GeneCardID
Allen Brain 20428
UniProtIDs with links Q7M6Y2

Clusters expressing Sox11

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.4727 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.7874 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
1.0286 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
0.8033 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.3495 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.5013 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.481 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.3831 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
0.4038 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.3802 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.3947 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
0.2854 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
3.2484 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
4.0692 35 DGNBL1 Granule neuroblasts, dentate gyrus Telencephalon
2.964 36 SZNBL Neuronal intermidate progenitor cells Telencephalon
1.8174 37 OBNBL3 Neuroblasts, olfactory bulb Telencephalon
0.3226 42 OBINH4 Inhibitory neurons, olfactory bulb Telencephalon
0.446 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.6871 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
0.5893 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.4576 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.2966 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.4649 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.3654 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
0.3889 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.75 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.8261 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.375 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
0.5619 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
0.5963 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.4444 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.2857 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.48 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.4483 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
0.3294 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.3541 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.3795 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.6345 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.8871 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
0.6364 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.4199 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.4632 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.9808 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.3837 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.3346 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.3673 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.5446 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
1.1402 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.4675 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.3478 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
0.2813 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.2972 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.4032 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
0.4 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
0.8636 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
0.381 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.4945 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
0.3608 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.5973 177 CBNBL2 Neuroblasts, cerebellum Rhombencephalon
1.2857 182 ENT1 Nitrergic enteric neurons Neural crest
0.5607 183 ENT2 Nitrergic enteric neurons Neural crest
0.6903 184 ENT3 Nitrergic enteric neurons Neural crest
1.3484 185 ENT4 Cholinergic enteric neurons Neural crest
1.5251 186 ENT5 Cholinergic enteric neurons Neural crest
0.7203 187 ENT6 Cholinergic enteric neurons Neural crest
0.7097 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
1.8351 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.4227 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
0.4516 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.3472 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.4121 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
1.7067 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
1.8667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.7857 198 PSPEP8 Peptidergic (TrpM8), DRG Neural crest
0.6333 201 PSPEP5 Peptidergic (PEP1.2), DRG Neural crest
0.3333 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.4565 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.8684 208 PSNF1 Neurofilament (NF1), DRG Neural crest
1.078 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
1.1111 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
0.7741 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.5341 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
0.3939 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.3671 239 OPC Oligodendrocytes precursor cells CNS
0.4356 243 ENTG1 Enteric glia, proliferating Neural crest

Sox11 is a marker of the following clusters

Expression Index Symbol Description Region
3.2484 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
4.0692 35 DGNBL1 Granule neuroblasts, dentate gyrus Telencephalon
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6