Cntnap5a

Mus musculus contactin associated protein-like 5A (Cntnap5a)

Properties

GeneCntnap5a
EntrezID 636808
RefSeqIDs NM_001077425
GeneCardID
Allen Brain
UniProtIDs with links Q0V8T9

Clusters expressing Cntnap5a

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.5423 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.4727 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
1.2864 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.6278 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
1.2735 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
2.1024 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
4.0714 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
1.7541 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
2.0638 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
1.0913 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.5843 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.905 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
2.4808 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
1.2545 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.3456 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.5463 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
0.4219 26 DGGRC2 Granule neurons, dentate gyrus Telencephalon
0.8527 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
0.5201 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.6103 29 MSN3 D2 medium spiny neurons, striatum Telencephalon
0.9375 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
0.3898 31 MSN5 Patch D1/D2 neurons, striatum Telencephalon
0.6035 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
1.3363 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.9817 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.5837 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.4597 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
1.0863 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.4908 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
1.1321 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
1.6076 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.4775 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3474 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.4118 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
1.0276 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
1.1074 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.9649 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.9038 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
0.5972 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
1.3846 73 HYPEP7 Pmch neurons, hypothalamus Diencephalon
0.5532 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
0.9365 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
0.3429 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
0.4037 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.7969 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
0.6667 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.4772 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.4561 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.5325 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.7829 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.6047 89 HYPEP2 Peptidergic neurons, hypothalamus Diencephalon
0.619 90 MEINH14 Inhibitory neurons, midbrain Mesencephalon
0.6667 91 DEINH6 Peptidergic neurons, hypothalamus Diencephalon
0.474 94 HYPEP5 Vasopressin-producing cells, hypothalamus Diencephalon
0.338 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.5862 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
0.4324 104 SCINH4 Inhibitory neurons, spinal cord Spinal cord
1.0606 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.6122 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.547 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.371 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.3444 111 SCGLU4 Excitatory neurons, spinal cord Spinal cord
0.9405 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.75 113 SCGLU6 Excitatory neurons, spinal cord Spinal cord
1.0 114 SCGLU7 Excitatory neurons, spinal cord Spinal cord
0.6 115 SCGLU8 Excitatory neurons, spinal cord Spinal cord
0.7206 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.5125 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.6075 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
0.78 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.4077 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.5839 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
0.5516 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
0.597 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.6884 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.8656 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.7819 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.8831 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.9719 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.9893 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.8676 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
1.9231 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.7921 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.9592 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.6337 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
1.0088 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.59 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.6364 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
0.4012 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.407 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
0.7708 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.564 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.6718 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.7587 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.5984 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
1.24 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
2.7 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
2.4545 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
2.0 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
0.5154 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
0.8095 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.8909 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
2.0909 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
0.9794 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.96 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
0.4444 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
0.3248 179 SEPNBL Neuroblasts, septum Telencephalon
0.4748 180 OBNBL1 Neuroblasts, olfactory Telencephalon
1.7143 182 ENT1 Nitrergic enteric neurons Neural crest
2.7757 183 ENT2 Nitrergic enteric neurons Neural crest
1.5677 184 ENT3 Nitrergic enteric neurons Neural crest
0.3359 186 ENT5 Cholinergic enteric neurons Neural crest
1.1525 187 ENT6 Cholinergic enteric neurons Neural crest
1.7097 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
0.9485 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
1.3018 190 ENT9 Cholinergic enteric neurons Neural crest
0.2689 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.76 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest

Cntnap5a is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6