Atrx

Mus musculus alpha thalassemia/mental retardation syndrome X-linked (Atrx)

Properties

GeneAtrx
EntrezID 22589
RefSeqIDs NM_009530
GeneCardID
Allen Brain 22346
UniProtIDs with links Q61687 F6RDB7

Clusters expressing Atrx

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.6368 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.9616 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
1.0839 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
1.0182 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
1.1448 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.9741 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
1.2483 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
1.0545 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.9528 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
1.1622 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.5301 11 TEGLU6 Excitatory neurons, cerebral cortex Telencephalon
1.2205 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
1.0 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
1.3571 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
1.3607 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
1.2796 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
1.0918 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
1.105 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
1.1124 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.8058 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
1.2404 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
1.0843 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.8733 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
1.0764 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.5575 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
0.4836 26 DGGRC2 Granule neurons, dentate gyrus Telencephalon
0.7238 27 MSN1 D1 medium spiny neurons, striatum Telencephalon
0.6426 28 MSN2 D2 medium spiny neurons, striatum Telencephalon
0.5974 29 MSN3 D2 medium spiny neurons, striatum Telencephalon
0.6054 30 MSN4 D1 medium spiny neurons, striatum Telencephalon
0.578 31 MSN5 Patch D1/D2 neurons, striatum Telencephalon
0.381 32 MSN6 Matrix D1 neurons, striatum Telencephalon
0.4367 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
0.3316 36 SZNBL Neuronal intermidate progenitor cells Telencephalon
0.2879 37 OBNBL3 Neuroblasts, olfactory bulb Telencephalon
0.4504 38 OBINH1 Inhibitory neurons, olfactory bulb Telencephalon
0.3915 39 OBDOP2 Inhibitory neurons, olfactory nulb Telencephalon
0.3911 40 OBINH2 Inner horizontal cell, olfactory bulb Telencephalon
0.4008 41 OBINH3 Inhibitory neurons, olfactory bulb Telencephalon
0.3398 42 OBINH4 Inhibitory neurons, olfactory bulb Telencephalon
0.3269 43 OBNBL4 Inhibitory neurons, olfactory bulb Telencephalon
0.3065 44 OBNBL5 Inhibitory neurons, olfactory bulb Telencephalon
0.5256 45 OBDOP1 Dopaminergic periglomerular interneuron, olfactory bulb Telencephalon
0.5893 46 OBINH5 External plexiform layer interneuron, olfactory bulb Telencephalon
0.5988 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
0.6108 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.5985 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.7477 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.6548 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.4078 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.5683 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.479 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.5427 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
0.8993 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.8773 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
1.1286 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.3951 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
0.3769 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.9273 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.4806 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.5056 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3684 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
0.3824 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.5241 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.8264 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.7895 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.6923 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
1.2778 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.825 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.6522 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.5397 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
0.3905 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
1.1009 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.5402 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
0.7188 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
0.7917 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.4481 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.4737 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.4123 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.4737 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.3613 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
0.3721 89 HYPEP2 Peptidergic neurons, hypothalamus Diencephalon
0.3295 94 HYPEP5 Vasopressin-producing cells, hypothalamus Diencephalon
0.4667 96 HYPEP8 Peptidergic neurons, hypothalamus Diencephalon
0.7231 98 SCINH10 Inhibitory neurons, spinal cord Spinal cord
0.3095 99 SCINH9 Inhibitory neurons, spinal cord Spinal cord
0.4943 100 SCINH8 Inhibitory neurons, spinal cord Spinal cord
0.4507 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.7241 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
0.6364 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
0.5405 104 SCINH4 Inhibitory neurons, spinal cord Spinal cord
0.4697 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.8367 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.4872 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.4586 109 SCGLU2 Excitatory neurons, spinal cord Spinal cord
0.4839 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.3778 111 SCGLU4 Excitatory neurons, spinal cord Spinal cord
0.5357 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.4 114 SCGLU7 Excitatory neurons, spinal cord Spinal cord
0.7333 115 SCGLU8 Excitatory neurons, spinal cord Spinal cord
0.3766 116 SCGLU9 Excitatory neurons, spinal cord Spinal cord
0.4706 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.725 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.6355 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
0.735 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.4464 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.3431 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
0.4108 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
0.4525 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.6812 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.7311 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.642 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.6277 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.8233 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.5968 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
1.0699 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.6833 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.7353 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.5266 135 DECHO2 Cholinergic neurons, habenula Diencephalon
1.5577 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
1.052 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
1.1868 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.7745 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.7327 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
1.0408 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.495 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
0.7816 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.545 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.4416 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
0.5319 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
0.5942 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
0.4691 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.3721 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
0.9083 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.5011 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.5263 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.5729 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.5286 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.5493 155 MEINH8 Inhibitory neurons, midbrain Mesencephalon
0.7692 156 HBINH1 Inhibitory neurons, hindbrain Rhombencephalon
0.5276 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
0.6667 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
1.0968 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
1.2273 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
1.3 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
1.5 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
1.7143 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
0.7308 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.4643 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
1.4 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
2.8182 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
0.9588 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.76 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
1.2727 170 HBINH8 Inhibitory neurons, hindbrain Rhombencephalon
0.5 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
0.8235 172 CBINH2 Granular layer interneurons, cerebellum Rhombencephalon
0.4305 174 CBINH1 Molecular layer interneurons, cerebellum Rhombencephalon
0.4969 178 CBNBL1 Neuroblasts, cerebellum Rhombencephalon
0.3846 179 SEPNBL Neuroblasts, septum Telencephalon
0.5396 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.4578 181 OBNBL2 Neuroblasts, olfactory bulb Telencephalon
1.5714 182 ENT1 Nitrergic enteric neurons Neural crest
1.4673 183 ENT2 Nitrergic enteric neurons Neural crest
0.9613 184 ENT3 Nitrergic enteric neurons Neural crest
0.8968 185 ENT4 Cholinergic enteric neurons Neural crest
0.7568 186 ENT5 Cholinergic enteric neurons Neural crest
0.9407 187 ENT6 Cholinergic enteric neurons Neural crest
1.1935 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
1.2474 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
1.0592 190 ENT9 Cholinergic enteric neurons Neural crest
0.3387 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.4 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.5357 198 PSPEP8 Peptidergic (TrpM8), DRG Neural crest
0.3152 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.3191 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.3185 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.3182 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.3976 216 COP2 Committed oligodendrocytes cells (COP), pons/medulla specific CNS
0.3481 217 NFOL2 Newly formed oligodendrocytes (NFOL), pons/medulla specific CNS
0.3213 219 MFOL2 Myelin forming oligodendrocytes (MFOL) CNS
0.5318 220 MFOL1 Myelin forming oligodendrocytes (MFOL) CNS
0.2762 221 MOL1 Mature oligodendrocytes CNS
0.3788 222 MOL2 Mature oligodendrocytes, hindbrain CNS
0.3077 223 MOL3 Mature oligodendrocytes, spinal cord enriched (high Klk6) CNS
0.7358 224 CHOR Chorid plexus epithelial cells CNS
0.5413 227 EPEN Ependymal cells CNS
0.2976 239 OPC Oligodendrocytes precursor cells CNS
0.9816 243 ENTG1 Enteric glia, proliferating Neural crest
0.3509 244 ENTG2 Enteric glia Neural crest
0.3815 245 ENTG3 Enteric glia Neural crest
0.5181 246 ENTG4 Enteric glia Neural crest
0.6334 247 ENTG5 Enteric glia Neural crest
0.5105 248 ENTG6 Enteric glia Neural crest
0.6628 249 ENTG7 Enteric glia Neural crest
0.9388 250 ENMFB Enteric mesothelial fibroblasts Neural crest
0.3577 251 ABC Vascular leptomeningeal cells Neural crest
0.6606 254 VECA Vascular endothelial cells, arterial Mesoderm
0.581 257 PER1 Pericytes Mesoderm
0.5943 258 PER2 Pericytes, possibly mixed with VENC Mesoderm
0.3551 259 VECC Vascular endothelial cells, capillary Mesoderm
0.3723 260 VECV Vascular endothelial cells, venous Mesoderm

Atrx is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6