5330434G04Rik

Mus musculus RIKEN cDNA 5330434G04 gene (5330434G04Rik), long non-coding RNA.

Properties

Gene5330434G04Rik
EntrezID 100043213
RefSeqIDs n / a
GeneCardID
Allen Brain
UniProtIDs with links

Clusters expressing 5330434G04Rik

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.3441 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.5952 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
0.4754 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.5806 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.3814 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.5068 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.4831 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.38 20 TEGLU22 Excitatory neurons, amygdala Telencephalon
0.5096 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.3117 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.6173 45 OBDOP Dopaminergic periglomerular interneuron, olfactory bulb Telencephalon
0.4643 46 OBINH6 External plexiform layer interneuron, olfactory bulb Telencephalon
0.528 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
0.509 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.7156 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.8373 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.7981 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.5922 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.8214 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.754 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.6469 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
0.7482 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
1.0491 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
1.4036 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.6914 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
0.525 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
1.3015 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.6217 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.853 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.614 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
0.6176 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.5931 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
1.1074 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.7544 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
1.2115 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
2.4028 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.975 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
1.1304 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
1.0313 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
0.8085 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
0.614 76 MBDOP1 Dopaminergic neurons, periaqueductal grey Mesencephalon
0.6349 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
1.1714 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
1.4037 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
1.1609 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
1.5938 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
1.1667 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.4207 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.4205 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.7018 85 DEINH4 Inhibitory neurons, thalamus Diencephalon
0.4318 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.5197 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.3874 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
0.7674 89 HYPEP2 Peptidergic neurons, hypothalamus Diencephalon
0.5238 90 MEINH14 Inhibitory neurons, midbrain Mesencephalon
0.4167 91 DEINH6 Peptidergic neurons, hypothalamus Diencephalon
0.4046 94 HYPEP5 Vasopressin-producing cells, hypothalamus Diencephalon
0.5102 95 HYPEP4 Oxytocin-producing cells, hypothalamus Diencephalon
0.32 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.5077 98 SCINH10 Inhibitory neurons, spinal cord Spinal cord
0.381 99 SCINH9 Inhibitory neurons, spinal cord Spinal cord
0.7273 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
1.1061 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.6429 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.5556 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.4038 108 SCGLU1 Excitatory neurons, spinal cord Spinal cord
0.4032 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.4286 116 SCGLU9 Excitatory neurons, spinal cord Spinal cord
0.5421 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
1.07 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.747 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.8321 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
0.6174 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
0.9278 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.5797 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.5213 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.6255 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.7446 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.7831 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.8226 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
0.5455 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.5231 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.6765 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.401 135 DECHO2 Cholinergic neurons, habenula Diencephalon
1.2885 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.7051 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.4591 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.6181 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.6634 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.5306 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.5842 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
0.7437 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.465 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.526 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
0.766 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
0.6087 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
0.7593 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.7093 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
1.0833 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.8134 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.5449 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.6701 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.6286 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.6197 155 MEINH8 Inhibitory neurons, midbrain Mesencephalon
1.0769 156 HBINH1 Inhibitory neurons, hindbrain Rhombencephalon
0.6299 157 HBINH3 Inhibitory neurons, hindbrain Rhombencephalon
0.7867 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
0.9032 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
2.0 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
1.6 161 HBCHO1 Cholinergic neurons, hindbrain Rhombencephalon
2.0 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
1.1429 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
0.8154 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.2302 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
1.2073 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
1.9091 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
0.701 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
0.68 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
0.5 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
0.6471 172 CBINH2 Granular layer interneurons, cerebellum Rhombencephalon
0.3926 178 CBNBL1 Neuroblasts, cerebellum Rhombencephalon
0.2991 179 SEPNBL Neuroblasts, septum Telencephalon
0.5899 180 OBNBL1 Neuroblasts, olfactory Telencephalon
1.5 182 ENT1 Nitrergic enteric neurons Neural crest
1.2991 183 ENT2 Nitrergic enteric neurons Neural crest
0.7419 184 ENT3 Nitrergic enteric neurons Neural crest
0.671 185 ENT4 Cholinergic enteric neurons Neural crest
0.668 186 ENT5 Cholinergic enteric neurons Neural crest
1.5 187 ENT6 Cholinergic enteric neurons Neural crest
2.1613 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
2.3918 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
2.497 190 ENT9 Cholinergic enteric neurons Neural crest
0.4639 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
0.4032 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.3863 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.4505 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
1.0267 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
1.0667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.4314 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.5652 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.5 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
0.4194 206 PSNF3 Neurofilament (NF2/3), DRG Neural crest
0.386 207 PSNF2 Neurofilament (NF4/5), DRG Neural crest
0.4894 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.5556 212 PSNP4 Non-peptidergic (NP2.1), DRG Neural crest
0.5455 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest

5330434G04Rik is a marker of the following clusters

Expression Index Symbol Description Region

ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH6 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBINH5 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6